#!/bin/bash #SBATCH -o ./output/%x.%j.%N.out #SBATCH -e ./output/%x.%j.%N.err #SBATCH -D ./ #SBATCH -J mcr_mpmd #SBATCH --get-user-env #SBATCH --export=NONE #SBATCH --partition=test #SBATCH --nodes=1 #SBATCH --tasks-per-node=10 #SBATCH --cpus-per-task=1 #SBATCH --time=0:10:00 #SBATCH --account=MY_PROJECT_ID ##SBATCH --ear=off # switch on/off as needed #=============================================================================== # USER-DEFINED INPUT #=============================================================================== APPNAME=./bin/mcr_run.exe # Edit here -> name MCR compiled executable MCRMODULE=MATLAB-MCR-MODULE # Edit here -> set MCR module export SIZE_MATRIX_A="[2000 1000]" export SIZE_MATRIX_B="[1000 8000]" #=============================================================================== # SET MODULES AND ENVIRONMENT VARIABLES #=============================================================================== module load slurm_setup # Load Matlab Compiler Runtime. module rm matlab module load $MCRMODULE # Set MCR cache path to SCRATCH. Don't use HOME directory! export MCR_CACHE_ROOT=${SCRATCH}/MCR_MPMD_JOBID${SLURM_JOB_ID} # Set general temp. path (some MATLAB releases want to have TMP). export TMP=$SCRATCH #=============================================================================== # RUN APPLICATION #=============================================================================== mpiexec ./app-wrapper.sh $APPNAME